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I followed the JPA modelgen guide and i was able to generate the canonical metamodel which i need. With this pom set up:
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.6</source>
<target>1.6</target>
<compilerArgument>-proc:none</compilerArgument>
</configuration>
</plugin>
<plugin>
<groupId>org.bsc.maven</groupId>
<artifactId>maven-processor-plugin</artifactId>
<version>2.0.6-redhat</version>
<executions>
<execution>
<id>process</id>
<goals>
<goal>process</goal>
</goals>
<phase>generate-sources</phase>
<configuration>
<outputDirectory>target/metamodel</outputDirectory>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>build-helper-maven-plugin</artifactId>
<version>1.3</version>
<executions>
<execution>
<id>add-source</id>
<phase>generate-sources</phase>
<goals>
<goal>add-source</goal>